R Dataset / Package boot / nodal

On this R-data statistics page, you will find information about the nodal data set which pertains to Nodal Involvement in Prostate Cancer. The nodal data set is found in the boot R package. You can load the nodal data set in R by issuing the following command at the console data("nodal"). This will load the data into a variable called nodal. If R says the nodal data set is not found, you can try installing the package by issuing this command install.packages("boot") and then attempt to reload the data with the library() command. If you need to download R, you can go to the R project website. You can download a CSV (comma separated values) version of the nodal R data set. The size of this file is about 787 bytes.

Nodal Involvement in Prostate Cancer

Description

The nodal data frame has 53 rows and 7 columns.

The treatment strategy for a patient diagnosed with cancer of the prostate depend highly on whether the cancer has spread to the surrounding lymph nodes. It is common to operate on the patient to get samples from the nodes which can then be analysed under a microscope but clearly it would be preferable if an accurate assessment of nodal involvement could be made without surgery.

For a sample of 53 prostate cancer patients, a number of possible predictor variables were measured before surgery. The patients then had surgery to determine nodal involvement. It was required to see if nodal involvement could be accurately predicted from the predictor variables and which ones were most important.

Usage

nodal

Format

This data frame contains the following columns:

m

A column of ones.

r

An indicator of nodal involvement.

aged

The patients age dichotomized into less than 60 (0) and 60 or over 1.

stage

A measurement of the size and position of the tumour observed by palpitation with the fingers via the rectum. A value of 1 indicates a more serious case of the cancer.

grade

Another indicator of the seriousness of the cancer, this one is determined by a pathology reading of a biopsy taken by needle before surgery. A value of 1 indicates a more serious case of the cancer.

xray

A third measure of the seriousness of the cancer taken from an X-ray reading. A value of 1 indicates a more serious case of the cancer.

acid

The level of acid phosphatase in the blood serum.

Source

The data were obtained from

Brown, B.W. (1980) Prediction analysis for binary data. In Biostatistics Casebook. R.G. Miller, B. Efron, B.W. Brown and L.E. Moses (editors), 3–18. John Wiley.

References

Davison, A.C. and Hinkley, D.V. (1997) Bootstrap Methods and Their Application. Cambridge University Press.

Dataset imported from https://www.r-project.org.

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